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HHMI International Research Scholars
Shulamit Michaeli, Ph.D.
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BIOGRAPHY:

Dr. Michaeli earned her Ph.D. in microbiology from Tel-Aviv University in 1985. She then did postdoctoral work until 1990 at the University of California in San Francisco and Berkeley. From 1990 to 1999 she worked at the Weizmann Institute of Science in Rehovot, Israel. She has received the Clore Prize for Excellence, the Moshe Shilo Prize, and most recently in 1999 the Andre Lwoff Prize from the Pasteur-Weitzman Council and French Academy of Science. Currently, she holds a position as Associate Professor of the Life Sciences Department of Bar-Ilan University in Israel. Dr. Michaeli is working on a project entitled "Trans-Splicing and Protein Translocation in Trypanosomes."

RESEARCH ABSTRACT SUMMARY:

Trans-Splicing and Protein Translocation in Trypanosomes

Our research aims to understand the mechanism and machinery of trans-splicing and protein translocation mediated by the signal recognition particle in trypanosomes. Having elucidated many of the SL RNA–snRNA interactions during trans-splicing, we now focus our research on RNA-binding proteins and splicing factors and their role in trans-and cis-splicing, with the goal of identifying trans-splicing–specific factors. Silencing by RNAi of Sm proteins that bind to the sn and SL RNA demonstrates that these proteins are essential for both splicing reactions and for the stability of the U snRNAs. Surprisingly, SL RNA that accumulated in the cytoplasm during Sm silencing lacked the fourth unique cap nt. Our data suggest that SL RNA biogenesis involves a cytoplasmic phase and that the unique cap nts may have a role in export and import of the SL RNA during this complicated pathway. Interestingly, the SL RNA that accumulated in the Sm-silenced cells carried the unique pseudouridine at position –12. By silencing the SLA1 using snoRNAi, an RNAi-related mechanism that we recently discovered, we showed that the trypanosome-specific small RNA SLA1 guides this modification. We are currently investigating the role of this modification for the function of the SL RNA. To further understand how the SL RNP is brought to the spliceosome, we tagged in vivo splicing factors and silenced numerous splicing factors. Our results suggest that the SL RNP is brought to the spliceosome via its association with the hexameric snRNP complex.

In the protein translocation project, we demonstrated by purifying the SRP to homogeneity that the trypanosome SRP complex is the first eukaryotic complex that lacks the Alu-domain binding proteins. Silencing the chaperone and the SRP pathways suggests that membrane protein translocation is dependent on the SRP pathway, whereas signal peptide–containing proteins can transverse the ER membrane also by the chaperone pathway.


Photo: Kent Kallberg, Kallberg Studios

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